Disease knowledge bases

MalaCards

Integrated human disease compendium
"One card per disease, built from ~70 upstream sources."
integrativealiasesGeneCards

About the resource

MalaCards is a disease-centric companion to GeneCards from the Weizmann Institute. It assembles roughly 70 upstream sources — OMIM, Orphanet, MeSH, DO, ICD, NCI Thesaurus, ClinVar, GTR, GWAS Catalog, DrugBank, KEGG, Reactome and many others — into a single per-disease record. Each card aggregates aliases, gene associations, ranked variant evidence, pathways, drugs, clinical trials, phenotypes, publications and external cross-references.

It's particularly useful as a one-page jumping-off point: rather than visiting six databases to assemble what's known about a rare disorder, the card collates and ranks evidence with provenance links back to each source. Free for academic use; commercial use is licensed.

What you'd use it for

  1. 01Get an aggregated overview of a disease across many upstream sources
  2. 02Triangulate aliases and synonyms across vocabularies
  3. 03Pull a ranked candidate gene list for a rare disease
  4. 04Cross-reference associated drugs, trials and phenotypes in one view

How you access it

Web UIPer-card exportLicensed bulk data

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